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wgs mcrpc cohort  (10X Genomics)

 
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    Structured Review

    10X Genomics wgs mcrpc cohort
    (a) Landscape of rearrangements and sequencing metrics across the 10XG <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
    Wgs Mcrpc Cohort, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mcrpc+cohort/pmc06046279-59-5-3?v=10X+Genomics
    Average 86 stars, based on 1 article reviews
    wgs mcrpc cohort - by Bioz Stars, 2026-07
    86/100 stars

    Images

    1) Product Images from "Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing"

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    Journal: Cell

    doi: 10.1016/j.cell.2018.05.036

    (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
    Figure Legend Snippet: (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

    Techniques Used: Sequencing, Variant Assay

    (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.
    Figure Legend Snippet: (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

    Techniques Used:

    (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.
    Figure Legend Snippet: (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

    Techniques Used:

    (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.
    Figure Legend Snippet: (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

    Techniques Used:



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    (a) Landscape of rearrangements and sequencing metrics across the 10XG <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
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    Image Search Results


    (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

    Article Snippet: Annotation information for 10X Genomics WGS mCRPC cohort.

    Techniques: Sequencing, Variant Assay

    (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

    Article Snippet: Annotation information for 10X Genomics WGS mCRPC cohort.

    Techniques:

    (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

    Article Snippet: Annotation information for 10X Genomics WGS mCRPC cohort.

    Techniques:

    (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

    Article Snippet: Annotation information for 10X Genomics WGS mCRPC cohort.

    Techniques:

    (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

    Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

    Techniques: Sequencing, Variant Assay

    (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

    Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

    Techniques:

    (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

    Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

    Techniques:

    (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

    Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

    Techniques:

    (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

    Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

    Techniques: Sequencing, Variant Assay

    (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

    Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

    Techniques:

    (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

    Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

    Techniques:

    (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

    Journal: Cell

    Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

    doi: 10.1016/j.cell.2018.05.036

    Figure Lengend Snippet: (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

    Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

    Techniques: